Category: Ecology

Ecology

From a frustrated undergraduate to a motivated PhD: The story of YOLO-Behaviour for automated behavioural coding from videos

Post provided by Alex Chan Hoi Hang, PhD student, Centre for the Advanced Study of Collective Behaviour, University of Konstanz The story of this project can be traced back to 2019, as a second-year undergraduate in biological sciences at Imperial College London, UK, where I took an animal behaviour course. For one of the hands-on sessions, Dr. Julia Schroeder (who later became my undergraduate and … Continue reading From a frustrated undergraduate to a motivated PhD: The story of YOLO-Behaviour for automated behavioural coding from videos

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Ecology, Methods papers

Addressing observational biases in data-driven approaches of zoonotic hazard prediction

Post provided by Andrea Tonelli Over the past five decades, more than half of emerging infectious diseases in humans originated from animals, with zoonotic pathogens posing a growing threat to global health. Shifts in land use, climate change, direct use of wildlife and biodiversity loss all influence human exposure to pathogens of wild animals, shaping the likelihood of zoonotic spillover events. In the wake of … Continue reading Addressing observational biases in data-driven approaches of zoonotic hazard prediction

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Code and Applications, Ecology, Statistical methods

Into the Swarm-Verse: quantifying collective motion across species and contexts

Post provided by Marina Papadopoulou Authors We are three researchers interested in collective animal behaviour. Marina Papadopoulou is a postdoctoral researcher at Tuscia University in Italy, Simon Garnier is a Professor at the New Jersey Institute of Technology (USA), and Andrew King is an Associate Professor at Swansea University (UK). As a Greek-French-Welsh team with empirical, mathematical, and computational backgrounds in different study systems, we … Continue reading Into the Swarm-Verse: quantifying collective motion across species and contexts

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Ecology

Avoiding Confusion: Modelling Image Identification Surveys with Classification Errors

Post provided by Jon Barry We are a group comprised of statisticians, ecologists and a computer scientist. Back in 2021 when this work started, we were all employed at the Centre for Environment, Fisheries and Aquacultural Science (Cefas) at Lowestoft, U.K. Since then, Robert, our computer scientist, has ‘jumped ship’ (no pun intended) to the Alan Turing Institute. We were aware that AI image recognition … Continue reading Avoiding Confusion: Modelling Image Identification Surveys with Classification Errors

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Ecology, Field Methods

Ten practical guidelines for microclimate research in terrestrial ecosystems

Post provided by  Jonas Lembrechts. Blogpost adapted from: http://www.the3dlab.org: Ten practical guidelines | The 3D lab Ecologists and biogeographers are increasingly recognizing the critical role of microclimate in addressing a wide range of research questions. Consequently, many researchers are incorporating microclimate sensors into their studies. While deploying these sensors might seem straightforward—simply plugging them in and collecting data—there are numerous important factors to consider. Until … Continue reading Ten practical guidelines for microclimate research in terrestrial ecosystems

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Ecology, Field Methods, Practical Tools

Look inside: a handy tool for casting the enclosed nest structure of birds

Post provided by Jing-Chia Guo. To understand something, we often describe its appearance and shape: The ball is round, the can is cylinder, and the pillow is kind of rectangle. However, most natural creatures are irregular in shape, so it’s difficult for people to quantify or define them. Sometimes, scientists are even unable to get their hands on the objects they need, and that is … Continue reading Look inside: a handy tool for casting the enclosed nest structure of birds

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Ecology, Field Methods

For worse and for better: the complicated marriage between biologging and wild animal welfare

Post provided by Michaël Beaulieu A cold Encounter in the Wild When talking about animal welfare to scientists who commonly use biologging tools to monitor the behaviour or physiology of wild animals in an ecological or conservation context, I have noticed that the first thing that usually comes to mind for them is the unwanted impact that biologging may have on animal welfare. Much has … Continue reading For worse and for better: the complicated marriage between biologging and wild animal welfare

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Ecology

Key Concepts in Ecology: Competition 

This blog post on ‘Competition’ is part of the BES ‘Key Concepts in Ecology’ series, designed to help ecologists in learning the key topics in ecology! Take a look at the full series for a list of key topics you might typically find in an ecology textbook, each providing a quick introduction to the topic, and a list of suggested papers for students to refer … Continue reading Key Concepts in Ecology: Competition 

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Code and Applications, Ecology

ToxTrac: A free and user-friendly animal tracking software

Post provided by Magnus Andersson Animal tracking software no longer has to be costly or require advanced computational science skills to operate. Over the last decade, a significant number of free animal tracking software options have been released. However, many of these options suffer from infrequent updates and demand considerable computational expertise to utilize effectively. To address this issue, the creators of ToxTrac launched the … Continue reading ToxTrac: A free and user-friendly animal tracking software

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Ecology, Evolution

Key Concepts in Ecology: Adaptations to variable environments 

This blog post on ‘Adaptations to variable environments’ is part of the BES ‘Key Concepts in Ecology’ series, designed to help ecologists in learning the key topics in ecology! Take a look at the full series for a list of key topics you might typically find in an ecology textbook, each providing a quick introduction to the topic, and a list of suggested papers for … Continue reading Key Concepts in Ecology: Adaptations to variable environments 

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