Editor Recommendation: Assessing Strengths and Weaknesses of DNA Metabarcoding-Based Macroinvertebrate Identification for Routine Stream Monitoring

Post provided by Andrew R. Mahon The use of molecular methods for monitoring and surveillance of organisms in aquatic and marine systems has become more and more common. We’ve since expanded this technology this through using both captured whole organisms and collecting/filtering environmental DNA (eDNA).  These methods naturally migrated from single species, active surveillance methods towards using high throughput sequencing as a method of passive … Continue reading Editor Recommendation: Assessing Strengths and Weaknesses of DNA Metabarcoding-Based Macroinvertebrate Identification for Routine Stream Monitoring

How Clean are Finnish Rivers?

Below is a press release about the Methods paper ‘Assessing strengths and weaknesses of DNA metabarcoding-based macroinvertebrate identification for routine stream monitoring‘ taken from the University of Duisburg-Essen.

©Shanthanu Bhardwaj
©Shanthanu Bhardwaj

Dragonflies, mayflies and water beetles have one thing in common: They indicate how clean the streams are in which they live. Scientists from the University of Duisburg-Essen and the Finnish Environment Institute (SYKE) have developed a DNA-based method, which allows to assess the stream water quality with unprecedented speed and accuracy. The article – ‘Assessing strengths and weaknesses of DNA metabarcoding-based macroinvertebrate identification for routine stream monitoring‘ – was just released in the esteemed peer-reviewed journal Methods in Ecology and Evolution.

Traditional stream assessment using visual identification of indicator species is time-consuming, expensive and procedures are seldom standardised. Especially small organisms may look similar and misidentifications happen frequently. Using a genetic method to identify the species these concerns are not an issue, as even small organisms can be securely identified using a DNA marker. Continue reading “How Clean are Finnish Rivers?”