October Issue out now!

We have a larger issue of 17 articles this month, featuring the ethics of wild animal research, an eco-acoustic monitoring network, a programmable optomotor and much more.

Senior Editor Rob Freckleton has selected six featured articles – find out about them below.

We also have three Applications, one Practical Tools and seven articles that are freely available to everyone – no subscription required!

India StephensonOctober 1, 2020October 1, 2020Leave a comment

General

Sharing is Caring: Working With Other People’s Data

Post provided by Mariana García Criado, Isla Myers-Smith, Lander Baeten, Andrew Cunliffe, Gergana Daskalova, Elise Gallois and Jeffrey Kerby

The Team Shrub research group in 2017 on Qikiqtaruk – Herschel Island in the Canadian Arctic. Not only do Team Shrub work with other people’s data, we collect our own to share publicly following open science best practice. (Photo credit: Sandra Angers-Blondin, www.teamshrub.com).

Team Shrub (www.teamshrub.com), are ecologists working to understand how global change alters plant communities and ecosystem processes. In May 2020, Team Shrub held a lab meeting to discuss working with other people’s data. Inspired by the conversation, they decided to put a blog post together to explore the importance of careful data cleaning in open science, provide 10 best practice suggestions for working with other people’s data, and discuss ways forward towards more reproducible science.

Continue reading “Sharing is Caring: Working With Other People’s Data”

streamdnaSeptember 4, 2020August 10, 2020Leave a comment

Journal Issues, Methods papers

Issue 11.9: Methods for individual bird recognition, zooplankton sampling and more!

The September issue of Methods is now online! 11.9 JPEG

We have a larger issue of 14 articles this month, featuring methods for individual bird recognition, zooplankton sampling, coral health assessment and much more.

Senior Editor Lee Hsiang Liow has selected five featured articles – find out about them below. We also have three Applications, three Practical Tools articles and 11 articles that are freely available to everyone – no subscription required!

Continue reading “Issue 11.9: Methods for individual bird recognition, zooplankton sampling and more!”

Harriet RhodesSeptember 2, 2020September 25, 2020Leave a comment

Code and Applications, Ecology, Methods papers, Theoretical methods

Creating a package to infer species coexistence

Post provided by Ignasi Bartomeus, David García-Callejas, and Oscar Godoy

Ignasi Bartomeus and colleagues share the story behind their recent Methods article ‘cxr: A toolbox for modelling species coexistence in R’.

This post recalls the journey on how we ended up developing cxr (acronym for CoeXistence relationships in R), an R package for quantifying interactions among species and their coexistence relationships. In other words, it provides tools for telling apart the situations in which different species can persist together in a community from the cases in which one species completely overcomes another.

Continue reading “Creating a package to infer species coexistence”

Daniel CaetanoAugust 18, 2020August 18, 20201 Comment

Ecology, Field Methods, Methods papers, Robert May Prize

Navigating the data-rich world of aquatic acoustic telemetry

Post provided by Kim Whoriskey

Early Career Researcher Kim Whoriskey takes us behind the Methods paper ‘Current and emerging statistical techniques for aquatic telemetry data: A guide to analysing spatially discrete animal detections’ which led to her being shortlisted for our Robert May Prize in 2019.

Understanding how aquatic animals move is becoming increasingly important for protecting them. Knowing where they migrate, how long they stay, and what they do when they travel through changing marine environments provides us with key information on movement corridors, habitat hotspots, and changing population distributions. This information can then be used to help manage and conserve many different aquatic species, from developing guidelines for recreational fishing practices to defining marine spatial planning measures.

sharks

Continue reading “Navigating the data-rich world of aquatic acoustic telemetry”

Harriet RhodesAugust 14, 2020August 14, 2020Leave a comment

Field Methods, Methods papers, Practical Tools

How to Sample Nectar of Flowers at Height

Post provided by Daniela Scaccabarozzi, Tristan Campbell and Kenneth Dods.

Daniela Scaccabarozzi, Tristan Campbell and Kenneth Dods tell us about the logistical challenges of sampling flowers at height and their new ground-based method for overcoming these problems.

Operational maneuvers while using the practical ground-based tool for nectar collection, prior to placing the organza bag over the inflorescence. Picture credit: Tristan Campbell.

Sampling flower nectar from forest canopies is logistically challenging, as it requires physical access to the canopy at a height greater than can be achieved by hand. The most common solutions comprise the use of cherry pickers, cranes or tree climbers, however these techniques are generally expensive, complex to organise, and often involve additional safety risk assessment and specialised technicians.

Continue reading “How to Sample Nectar of Flowers at Height”

streamdnaAugust 10, 2020Leave a comment

Code and Applications, Ecology, Evolution, Methods papers, Second Language Post, Statistical methods, Theoretical methods

Para, piensa, y ten cuidado con las configuraciones por defecto

Post escrito por Paula Pappalardo (con aportes de Elizabeth Hamman, Jim Bence, Bruce Hungate & Craig Osenberg)

This post is also available in English.

Pasaste meses laboriosamente colectando datos de artículos científicos acerca de tu pregunta favorita, tienes decenas de artículos perfectamente organizados en una base de datos, ya encontraste el programa o código para analizar los datos, y entonces imaginas como tu publicación va a ser la más citada en tu campo de investigación mientras haces unos gráficos lindísimos. Si esto te suena familiar, seguramente has hecho un meta-análisis. Un meta-análisis usa modelos estadísticos para combinar datos de distintas publicaciones para responder a una pregunta específica.

Lo que quizás no te diste cuenta mientras navegabas los pasos del meta-análisis, es que pequeñas decisiones (a veces pareciendo de muy poca importancia) pueden tener grandes efectos en los resultados. Si quieres saber más acerca de una de estas decisiones en particular… ¡sigue leyendo!

Daniel CaetanoAugust 4, 2020August 3, 2020Leave a comment

Code and Applications, Ecology, Evolution, Methods papers, Statistical methods, Theoretical methods

Stop, think, and beware of default options

Post provided by Paula Pappalardo (with contributions from Elizabeth Hamman, Jim Bence, Bruce Hungate & Craig Osenberg)

Esta publicación también está disponible en español.

You spent months carefully collecting data from articles addressing your favorite scientific question, you have dozens of articles neatly arranged on a spreadsheet, you found software or code to analyze the data, and then daydream about how your publication will be the most cited in your field while making cool plots. If that sounds familiar, you have probably done a meta-analysis. Meta-analysis uses statistical models to combine data from different publications to answer a specific question.

What you may not have realized when going down the meta-analysis rabbit hole, is that small, seemingly inconsequential, choices can greatly affect your results. If you want to know about one of them lurking behind the scenes… read on!

Daniel CaetanoAugust 4, 2020August 3, 2020Leave a comment

Uncategorized

Our August Issue is OUT NOW

The August issue of Methods is now online!

We have a larger issue of 14 articles this month, featuring tools for microbial evolution experiments, automatic biomass estimation of invertebrates, labeling biological samples and much more.

Senior Editor Bob O’Hara has selected five featured articles this month – find out about them below. We also have four Applications, one Practical Tools article and 10 articles that are freely available to everyone – no subscription required!

Continue reading “Our August Issue is OUT NOW”

Harriet RhodesAugust 3, 2020August 3, 2020Leave a comment

Journal updates, Methods 10th, Methods 10th Anniversary, Methods papers, Uncategorized

Happy 10th Anniversary to us!

This year is our 10th Anniversary! To celebrate, we’ve made a timeline of highlights from the past decade, from the first paper ever submitted, to a top-cited article with 3,295 citations. We’d like to give a big thanks our dedicated editors, plus all the authors and reviewers who are developing the fields of ecology and evolution with groundbreaking new methods. Here’s to 10 more years! Continue reading Happy 10th Anniversary to us!

Harriet RhodesJuly 31, 2020July 31, 2020Leave a comment