International Women’s Day: What are the Biggest Problems Facing Gender Equality in STEM?

In recent years, there has been an increasing focus on encouraging women to join STEM fields, but there is still work that needs to be done. We asked our female Associate Editors what the biggest problems facing the push towards gender equality within STEM fields today are. Here are their answers:

janaJana McPherson: My impression is that entering is not the issue. Certainly in my fields of conservation and ecology, there seem to be lots of women undergraduates and graduates and still a very decent proportion of female postdocs. I think it is beyond that level that women start to become increasingly rare. At least in part this likely reflects the fact that it is around post-doc time that biological clocks start ticking, and that it is neither easy nor necessarily desirable to combine starting and raising a family with a prolific production of publications, a heavy teaching load and the need to magic up a bustling research lab out of the blue. To reduce that hurdle, I think universities and academics have to become more accepting and accommodating of part-time effort. And I mean institutionally as well as individually. I have conducted research on a part-time basis for years now, and have seen many colleagues and collaborators in academia positively flummoxed by the concept that NOTHING (work-wise) gets done between when I leave the office on a Thursday at 2pm and when I return to work Monday morning. And yes, my life outside the office involves minutes and the odd hour here and there where I’m not directly interacting with my kids or looking after the household during which I could theoretically get the odd bit of work done. But I have tried that approach and found it rather stressful, sleep-depriving and frustrating for family members competing for my attention with whatever ‘quick’ piece of work I was trying to finish.  So now I leave work at the office and whatever does not get done within office hours just has to wait until I’m next at work, no matter how urgent.

Tamara Munkemuller2Tamara Münkemüller: I guess that the main problems are related to family planning. On the one hand, in many countries it takes long to get a permanent position and it feels like taking a risk to have children before this. On the other hand, one seemingly frequent constellation are couples of two scientists where the man is a bit older. In this situation it often happens that the older person gets a permanent position first and the younger follows and tries to adapt. Then there is the more subtle problem of different communication styles of men and women and numerous selection processes that tend to prefer a communication style that is thought to be more typical for men.

Satu Ramula: I think that one of the current challenges is to keep women in the system. Many female scientists leave academia at some point, which makes the sex ratio skewed as there are not enough qualified women to compete for academic positions at upper levels. Continue reading “International Women’s Day: What are the Biggest Problems Facing Gender Equality in STEM?”

International Women’s Day: What Inspired You to Pursue a Career in Science?

Tomorrow (Tuesday 8 March) is International Women’s Day. To celebrate, we asked  our female Editors a few questions about gender equality (and other issues) in STEM and we’ll be posting their answers over the next four days.

We begin our International Women’s Day posts on a positive note, finding out a little more about our Editors. The first question that we asked them was: What made you want to pursue a career in science and were there any female scientists in particular who inspired you to pursue a career in STEM?

Jana VamosiJana Vamosi: I had no idea what I wanted to do until I was well into my twenties. I took a class in Evolutionary Biology at the end of my undergraduate degree. I loved learning the unifying theories and applying my nascent skills in biomathematics. I went on to start graduate studies with Dr Sally Otto at the University of British Columbia and her mentorship inspired me to consider a career in STEM.

Rachel_MccreaRachel McCrea: I always loved mathematics at school but never realised you could make a career out of it.  I didn’t think about my career path as such when choosing what to study at university but just chose a subject that I enjoyed.  My two (female) A-level maths teachers are to thank for me not pursuing medicine or veterinary science as they really supported me and taught me double-maths at A-level, even though only myself and one other student chose to take it.  I was inspired by Simon Singh’s book on Fermat’s Last Theorem and whilst at university I discovered that even though pure mathematics was not for me I really liked statistics so decided to study for an MSc.  Since then I have never turned back!  Continue reading “International Women’s Day: What Inspired You to Pursue a Career in Science?”

My Entropy ‘Pearl’: Using Turing’s Insight to Find an Optimal Estimator for Shannon Entropy

Post provided by Anne Chao (National Tsing Hua University, Taiwan)

Shannon Entropy

Not quite as precious as my entropy pearl
Not quite as precious as my entropy pearl ©Amboo Who

Ludwig Boltzmann (1844-1906) introduced the modern formula for entropy in statistical mechanics in 1870s. Since its generalization by Claude E. Shannon in his pioneering 1948 paper A Mathematical Theory of Communication, this entropy became known as ‘Shannon entropy’.

Shannon entropy and its exponential have been extensively used to characterize uncertainty, diversity and information-related quantities in ecology, genetics, information theory, computer science and many other fields. Its mathematical expression is given in the figure below.

In the 1950s Shannon entropy was adopted by ecologists as a diversity measure. It’s interpreted as a measure of the uncertainty in the species identity of an individual randomly selected from a community. A higher degree of uncertainty means greater diversity in the community.

Unlike species richness which gives equal weight to all species, or the Gini-Simpson index that gives more weight to individuals of abundant species, Shannon entropy and its exponential (“the effective number of common species” or diversity of order one) are the only standard frequency-sensitive complexity measures that weigh species in proportion to their population abundances. To put it simply: it treats all individuals equally. This is the most natural weighing for many applications. Continue reading “My Entropy ‘Pearl’: Using Turing’s Insight to Find an Optimal Estimator for Shannon Entropy”

On the Tail of Reintroduced Canada Lynx: Leveraging Archival Telemetry Data to Model Animal Movement

Post provided by FRANCES E. BUDERMAN

Animal Movement

218 Canada lynx were reintroduced to the San Juan Mountains between 1999 and 2006 with VHF/Argos collars. © Colorado Parks and Wildlife
218 Canada lynx were reintroduced to the San Juan Mountains between 1999 and 2006 with VHF/Argos collars. © Colorado Parks and Wildlife

Animal movement is a driving factor underlying many ecological processes including disease transmission, extinction risk and range shifts. Understanding why, when and how animals traverse a landscape can provide much needed information for landscape-level conservation and management practices.

The theoretical underpinnings for modelling animal movement were developed about seventy years ago. Technological developments followed, with radio-collars initially deployed on large mammals such as grizzly bears and elk. We can now monitor animal movement of a wide variety of species, including those as small as a honeybee, at an unprecedented temporal and spatial scale.

However, location-based data sets are often time consuming and costly to collect. For many species, especially those that are rare and elusive, pre-existing data sets may be the only viable data source to inform management decisions. Continue reading “On the Tail of Reintroduced Canada Lynx: Leveraging Archival Telemetry Data to Model Animal Movement”

Inverse Modelling and IPMs: Estimating Processes from Incomplete Information

Post provided by Edgar J. González

In demography, a set of processes (survival, growth, fecundity, etc.) interacts to produce observable patterns (population size, structure, growth rate, etc.) that change over time. With traditional approaches you follow the individuals of a population over some timespan and track all of these processes.

Demographic patterns and processes (Click to expand)
Demographic patterns and processes (Click to expand)

However, depending on the organism, some processes may be very hard to quantify (e.g. mortality or recruitment in animals or plants with long lifespans). You may have observed the patterns for the organism that you’re studying and, even better, measured some, but not all, of the processes. The question is: can we use this limited information to estimate the processes we couldn’t measure? Continue reading “Inverse Modelling and IPMs: Estimating Processes from Incomplete Information”

Key Technologies Used to Build the plant Package (and Maybe Soon Some Other Big Simulation Models in R)

Post provided by RICH FITZJOHN and DANIEL FALSTER

Our paper in Methods in Ecology and Evolution describes a new software package, plantplant is an individual-based simulation model that simulates the growth of individual trees, stands of competing plants, or entire metacommunities under a disturbance regime, using common physiological rules and trait-based functional trade-offs to capture differences among species.

Non-Linear Processes and Thousands of Plants

Since the development of gap models in the 1970s (e.g. Botkin 1972), researchers have been using computer simulations to investigate how elements of plant biology interact with competition and disturbance regimes to influence vegetation demography, structure and diversity. Simulating the competitive interactions among many thousands of plants, however, is no easy task.

Despite widespread recognition of the importance of key non-linear processes — such as size-structured competition, disturbance, and trait-based trade-offs — for vegetation dynamics, relatively few researchers have been brave (or daft) enough to try and incorporate such processes into their models. The situation is most extreme in theoretical ecology, where much contemporary theory (e.g. coexistence theory, neutral theory) is still built around completely unstructured populations.

Features of plant

Key processes modelled within the plant package.
Key processes modelled within the plant package.

The plant package attempts to change that by providing an extensible, open source framework for studying trait-, size- and patch-structured dynamics. One thing that makes the plant model significant is the focus on traits. plant is one of several attempts seeking to integrate current understanding about trait based trade-offs into a model of individual plant function (see also Moorcroft et al 2001Sakschewski et al 2015).

A second feature that makes the plant software significant, is it that is perhaps the first example where a computationally intensive model has been packaged up in a way that enables widespread usage, makes the model more usable and doesn’t  sacrifice speed.

In this post we will describe the key technologies used to build the plant software. Continue reading “Key Technologies Used to Build the plant Package (and Maybe Soon Some Other Big Simulation Models in R)”

Demography Beyond the Population Webinar: Register for Free Now

Webinar logoRegister for FREE for the first ever BES Publishing webinar based on our forthcoming Demography Beyond the Population Special Feature.

This hour long webinar will begin at 1pm (GMT) on Tuesday 1 March. It highlights some of the excellent articles soon to be published in the British Ecological Society journals Special Feature entitled “Demography Beyond the Population”. The Special Feature is a collaborative effort including articles in all six BES journals. This is the first time such a large ecological collaboration has been attempted worldwide. Using a cross-journal approach has allowed us to highlight the strongly interdisciplinary nature of the field of demography to its fullest potential as well as to lay down the foundations for future directions at the interface of ecology, evolution, conservation biology and human welfare. The webinar has several international speakers and will discuss the articles in the Special Feature and the implications for demography research going forward. Continue reading “Demography Beyond the Population Webinar: Register for Free Now”

Issue 7.1

Issue 7.1 is now online!

The January issue of Methods is now online!

As always, the first issue of the year is our sample issue. You can access all of the articles online free of charge. No subscription or membership is required!

We have two Open Access articles and two Applications papers in our January issue.

Recognizing False Positives: Environmental DNA (eDNA) is increasingly used for surveillance and detection of species of interest in aquatic and soil samples. A significant risk associated with eDNA methods is potential false-positive results due to laboratory contamination. To minimize and quantify this risk, Chris Wilson et al. designed and validated a set of synthetic oligonucleotides for use as species-specific positive PCR controls for several high-profile aquatic invasive species.

BiMat: An open-source MATLAB package for the study of the structure of bipartite ecological networks. BiMat enables both multiscale analysis of the structure of a bipartite ecological network – spanning global (i.e. entire network) to local (i.e. module-level) scales – and meta-analyses of many bipartite networks simultaneously. The authors have chosen to make this Applications article Open Access.

Gemma Murray et al. provide this month’s second Open Access article. In ‘The effect of genetic structure on molecular dating and tests for temporal signal‘ the authors use simulated data to investigate the performance of several tests of temporal signal, including some recently suggested modifications. The article shows that all of the standard tests of temporal signal are seriously misleading for data where temporal and genetic structures are confounded (i.e. where closely related sequences are more likely to have been sampled at similar times). This is not an artifact of genetic structure or tree shape per se, and can arise even when sequences have measurably evolved during the sampling period.

Our January issue also features articles on Monitoring, Population Ecology, Genetics, Evolution, Community Ecology, Diversity and more. Continue reading “Issue 7.1”

Methods in Ecology and Evolution 2015: The Year in Review

Happy New Year! We hope that you all had a wonderful Winter Break and that you’re ready to start 2016. We’re beginning the year with a look back at some of our highlights of 2015. Here’s how last year looked at Methods in Ecology and Evolution.

The Articles

We published some amazing articles in 2015, too many to mention them all here. However, we would like to say a massive thank you to all of the authors, reviewers and editors who contributed to the journal last year. Without your hard work, knowledge and generosity, the journal would not be where it is today. We really appreciate all of your time and effort. THANK YOU!

mee312268_CoverOpportunities at the Interface between Ecology and Statistics

There was only one Special Feature in the journal this year, but it was a great one. Arising from the 2013 Eco-Stats Symposium at the University of New South Wales and guest edited by Associate Editor David Warton, Opportunities at the Interface between Ecology and Statistics was one of the highlights of 2015 for us. It consists of seven articles written collaboratively by statisticians and ecologists and highlights the benefits of cross-disciplinary partnerships. Continue reading “Methods in Ecology and Evolution 2015: The Year in Review”

Maximising the Exposure of Your Research: Search Engine Optimisation and why it matters

This post is an outcome of the ‘Maximising the Exposure of Your Research’ Workshop at the BES 2015 Annual Meeting in Edinburgh (UK). If you’re interested in joining us for our 2016 Annual Meeting in Liverpool (UK), you can find some more information and pre-register HERE.

© Got Credit
© Got Credit

In recent years there has been a significant increase in the number of academic articles published. At the same time, readers are changing how they find content, tending towards a point of entry at article level as opposed to journal level. These two factors mean that it is increasingly necessary for authors to make their articles easy for relevant readers to find. Search Engine Optimisation (SEO) is one of the best ways to do this.

While writing your paper, there are a few things that you can do to optimise it for search engines, such as Google Scholar. The tips below focus on three areas that are prioritised by search engines when looking for content. Following these tips will help you to maximise the exposure of your research. Continue reading “Maximising the Exposure of Your Research: Search Engine Optimisation and why it matters”